Cluster: HRGMv2_2676_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2676
- CGC Family ID: CGCFAM_01090
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_1765 | 1870741 | 1870968 | - | 3.D.1.6.4 |
| pfam | HRGMv2_2676_1 | HRGMv2_2676_1_1766 | 1871207 | 1872685 | - | Mur_ligase_C | Mur_ligase_M |
| pfam | HRGMv2_2676_1 | HRGMv2_2676_1_1767 | 1872709 | 1874277 | - | POTRA_1 |
| CAZyme | HRGMv2_2676_1 | HRGMv2_2676_1_1768 | 1874315 | 1875442 | - | GT28 |
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_1769 | 1875498 | 1876811 | - | 2.A.103.1.3 |
Gene ID: HRGMv2_2676_1_1765
Type: TC
Location: 1870741 - 1870968 (-)
Type: TC
Location: 1870741 - 1870968 (-)
Gene ID: HRGMv2_2676_1_1766
Type: pfam
Location: 1871207 - 1872685 (-)
Type: pfam
Location: 1871207 - 1872685 (-)
Gene ID: HRGMv2_2676_1_1767
Type: pfam
Location: 1872709 - 1874277 (-)
Type: pfam
Location: 1872709 - 1874277 (-)
Gene ID: HRGMv2_2676_1_1768
Type: CAZyme
Location: 1874315 - 1875442 (-)
Type: CAZyme
Location: 1874315 - 1875442 (-)
Gene ID: HRGMv2_2676_1_1769
Type: TC
Location: 1875498 - 1876811 (-)
Type: TC
Location: 1875498 - 1876811 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.