Cluster: HRGMv2_2676_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2676
- CGC Family ID: CGCFAM_00005
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_2666 | 2862547 | 2863899 | + | 9.B.18.1.3 |
| CAZyme | HRGMv2_2676_1 | HRGMv2_2676_1_2667 | 2864049 | 2864894 | + | CE4 |
| pfam | HRGMv2_2676_1 | HRGMv2_2676_1_2668 | 2864902 | 2865714 | + | Metallophos |
| pfam | HRGMv2_2676_1 | HRGMv2_2676_1_2669 | 2865733 | 2866794 | + | Acetyltransf_1 | Acetyltransf_9 |
| CAZyme | HRGMv2_2676_1 | HRGMv2_2676_1_2670 | 2866895 | 2868094 | + | GT4 |
Gene ID: HRGMv2_2676_1_2666
Type: TC
Location: 2862547 - 2863899 (+)
Type: TC
Location: 2862547 - 2863899 (+)
Gene ID: HRGMv2_2676_1_2667
Type: CAZyme
Location: 2864049 - 2864894 (+)
Type: CAZyme
Location: 2864049 - 2864894 (+)
Gene ID: HRGMv2_2676_1_2668
Type: pfam
Location: 2864902 - 2865714 (+)
Type: pfam
Location: 2864902 - 2865714 (+)
Gene ID: HRGMv2_2676_1_2669
Type: pfam
Location: 2865733 - 2866794 (+)
Type: pfam
Location: 2865733 - 2866794 (+)
Gene ID: HRGMv2_2676_1_2670
Type: CAZyme
Location: 2866895 - 2868094 (+)
Type: CAZyme
Location: 2866895 - 2868094 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.