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Cluster: HRGMv2_2676_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2676_1 HRGMv2_2676_1_2498 2677888 2679495 - GT4
NULL(UNKNOWN) HRGMv2_2676_1 HRGMv2_2676_1_2499 2679530 2680324 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2676_1 HRGMv2_2676_1_2500 2680391 2681506 - Acyl_transf_3
TC HRGMv2_2676_1 HRGMv2_2676_1_2501 2681883 2683352 + 4.C.1.1.4
pfam HRGMv2_2676_1 HRGMv2_2676_1_2502 2683380 2683622 + PP-binding
NULL(UNKNOWN) HRGMv2_2676_1 HRGMv2_2676_1_2503 2683674 2684837 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2676_1 HRGMv2_2676_1_2504 2684979 2686118 + 2.A.1.15.18
Gene ID: HRGMv2_2676_1_2498
Type: CAZyme
Location: 2677888 - 2679495 (-)
Gene ID: HRGMv2_2676_1_2499
Type:
Location: 2679530 - 2680324 (-)
Gene ID: HRGMv2_2676_1_2500
Type: pfam
Location: 2680391 - 2681506 (-)
Gene ID: HRGMv2_2676_1_2501
Type: TC
Location: 2681883 - 2683352 (+)
Gene ID: HRGMv2_2676_1_2502
Type: pfam
Location: 2683380 - 2683622 (+)
Gene ID: HRGMv2_2676_1_2503
Type:
Location: 2683674 - 2684837 (+)
Gene ID: HRGMv2_2676_1_2504
Type: TC
Location: 2684979 - 2686118 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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