PROTEIN: HRGMv2_2676_1_2503
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Protein File & Metadata
Source:
HRGMv2_2676_1_2503.pdb
Genome ID:
Protein ID:
HRGMv2_2676_1_2503
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Protein Sequence
MYFFRREKIQ CRYQFSLRDA VDITLLQRAL TAALASAPYY TQRLVQEKRE MWLEPNTEPC 60 LVYPGSTMRN IPEQTNGYLF CVSCEGDTVY FDWHHFLLDG HGVSPLLTSI LEQYCNLRYG 120 TAFAVPQIVC DPPYDMEAML AEYPPVEYGS DVIQRDVVQT YEGALRRTRV CLSKQSLVEK 180 ALANNAKPVS ALMGLLCMAM REYLGKEKIQ YSYSSDTRDV AGVPNALYNC VCSFGHTVQL 240 QAQTRLADFV GDIDADIKRD LQPQSKRRRM ADQMGWVYKV NQQKAPLRIK QRVFQMGEYI 300 GGTISDFWLS YLGNPLMPAT PELAQYTTDF GVWVPPDGAS VGVEAASLNG KIILCIHNKA 360 PNPGLADILR KTFENEGVAV LEAEDLD 387
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0ERT7-F1-model_v4 | 1 | 378 | 12 | 437 | 0.7717 |
0.853 |
| AF-K0F199-F1-model_v4 | 1 | 378 | 15 | 414 | 0.7614 |
0.8225 |
| AF-K0EVX2-F1-model_v4 | 7 | 378 | 1 | 389 | 0.756 |
0.8086 |
| AF-Q9HYR6-F1-model_v4 | 1 | 379 | 12 | 433 | 0.7552 |
0.837 |
| AF-Q09710-F1-model_v4 | 1 | 379 | 13 | 446 | 0.7472 |
0.8329 |
| AF-A0A1D8PHJ5-F1-model_v4 | 1 | 379 | 10 | 418 | 0.7444 |
0.8084 |
| AF-K0FB89-F1-model_v4 | 1 | 379 | 17 | 413 | 0.7444 |
0.8028 |
| AF-P9WLD1-F1-model_v4 | 1 | 378 | 10 | 429 | 0.7419 |
0.8156 |
| AF-K0EPI1-F1-model_v4 | 1 | 378 | 13 | 417 | 0.7358 |
0.798 |
| AF-K0EJR8-F1-model_v4 | 1 | 379 | 7 | 410 | 0.7337 |
0.793 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A4FHR6-F1-model_v4 | GT28 | 1 | 378 | 383 | 795 | 0.5974 |
0.83 |
| AF-W5WA33-F1-model_v4 | GT28 | 1 | 379 | 384 | 778 | 0.5823 |
0.8 |
| AF-A0A7R7HY87-F1-model_v4 | GT28 | 1 | 379 | 350 | 768 | 0.5817 |
0.7947 |
| AF-A0A6H1REK1-F1-model_v4 | GT28 | 1 | 379 | 381 | 789 | 0.5807 |
0.8001 |
| AF-A0A223RRK0-F1-model_v4 | GT28 | 1 | 379 | 390 | 814 | 0.577 |
0.8069 |
| A0A1G6KFY6 | GT28 | 1 | 381 | 414 | 810 | 0.5692 |
0.7883 |
| AF-A0A810L0P6-F1-model_v4 | GT28 | 1 | 379 | 400 | 818 | 0.5672 |
0.7905 |
| A0A9Q8R8L9 | GT1 | 1 | 384 | 463 | 911 | 0.5669 |
0.8052 |
| AF-A0A1H1TJ86-F1-model_v4 | GT28 | 1 | 379 | 427 | 838 | 0.5651 |
0.7966 |
| AF-A0A1A8ZH35-F1-model_v4 | GT28 | 1 | 380 | 423 | 838 | 0.5628 |
0.7995 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A223RRK0 | GT28 | 1 | 379 | 390 | 814 | 0.577 |
0.8069 |
| A0A1G6KFY6 | GT28 | 1 | 381 | 414 | 810 | 0.5692 |
0.7883 |
| A0A810L0P6 | GT28 | 1 | 379 | 400 | 818 | 0.5672 |
0.7905 |
| A0A9Q8R8L9 | GT1 | 1 | 384 | 463 | 911 | 0.5669 |
0.8052 |
| A0A1H1TJ86 | GT28 | 1 | 379 | 427 | 838 | 0.5651 |
0.7966 |
| A0A1C4XH88 | GT28 | 1 | 380 | 435 | 853 | 0.5594 |
0.7971 |
| A0A6M7YQH5 | PL1_4 | 1 | 377 | 400 | 868 | 0.5563 |
0.7928 |
| AVT29363.1 | GT28 | 1 | 379 | 410 | 839 | 0.5557 |
0.7819 |
| A0A7W9KMN1 | GT28 | 1 | 379 | 381 | 757 | 0.5555 |
0.7586 |
| A0A2K8LSN4 | GT28 | 1 | 379 | 378 | 947 | 0.536 |
0.7798 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1q9j-assembly2.cif.gz_B | 1 | 379 | 11 | 397 | 0.7225 |
0.7707 |
| 1q9j-assembly1.cif.gz_A | 1 | 378 | 13 | 385 | 0.7176 |
0.7671 |
| 2zba-assembly2.cif.gz_B | 1 | 385 | 8 | 430 | 0.714 |
0.7738 |
| 3b2s-assembly1.cif.gz_A | 1 | 385 | 9 | 448 | 0.7124 |
0.7854 |
| 2zba-assembly1.cif.gz_A | 1 | 384 | 9 | 435 | 0.711 |
0.776 |
| 2rkv-assembly1.cif.gz_A | 1 | 385 | 9 | 443 | 0.7107 |
0.7797 |
| 3b30-assembly1.cif.gz_A | 1 | 385 | 10 | 446 | 0.7105 |
0.7819 |
| 2rkt-assembly1.cif.gz_A | 1 | 385 | 10 | 437 | 0.7098 |
0.7747 |
| 5du9-assembly2.cif.gz_B | 1 | 379 | 8 | 419 | 0.7089 |
0.7786 |
| 2zba-assembly3.cif.gz_C | 1 | 385 | 9 | 429 | 0.7079 |
0.7662 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q09710-F1-model_v4 | 1 | 379 | 13 | 446 | 0.7472 |
0.8329 |
| AF-P9WLD1-F1-model_v4 | 1 | 378 | 10 | 429 | 0.7419 |
0.8156 |
| AF-A1UGV8-F1-model_v4 | 1 | 379 | 14 | 407 | 0.7387 |
0.7943 |
| AF-Q1B849-F1-model_v4 | 1 | 379 | 14 | 407 | 0.7385 |
0.7941 |
| AF-A3Q0G0-F1-model_v4 | 1 | 379 | 14 | 407 | 0.7381 |
0.7939 |
| AF-P9WLD0-F1-model_v4 | 1 | 378 | 10 | 429 | 0.7378 |
0.811 |
| AF-A1T9S1-F1-model_v4 | 1 | 379 | 13 | 411 | 0.7369 |
0.7966 |
| AF-A0PQ31-F1-model_v4 | 1 | 379 | 13 | 408 | 0.7349 |
0.794 |
| AF-P53304-F1-model_v4 | 1 | 381 | 9 | 468 | 0.724 |
0.8188 |
| AF-Q4WYN5-F1-model_v4 | 1 | 380 | 6 | 462 | 0.7189 |
0.8115 |