Cluster: HRGMv2_2676_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2676
- CGC Family ID: CGCFAM_02429
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_2008 | 2127575 | 2128633 | - | 9.A.23.1.1 |
| CAZyme | HRGMv2_2676_1 | HRGMv2_2676_1_2009 | 2129025 | 2130458 | + | GH25 |
| pfam | HRGMv2_2676_1 | HRGMv2_2676_1_2010 | 2131084 | 2131737 | + | DUF4830 |
| STP | HRGMv2_2676_1 | HRGMv2_2676_1_2011 | 2132026 | 2132283 | + | PTS-HPr |
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_2012 | 2132387 | 2134030 | + | 8.A.7.1.1 |
Gene ID: HRGMv2_2676_1_2008
Type: TC
Location: 2127575 - 2128633 (-)
Type: TC
Location: 2127575 - 2128633 (-)
Gene ID: HRGMv2_2676_1_2009
Type: CAZyme
Location: 2129025 - 2130458 (+)
Type: CAZyme
Location: 2129025 - 2130458 (+)
Gene ID: HRGMv2_2676_1_2010
Type: pfam
Location: 2131084 - 2131737 (+)
Type: pfam
Location: 2131084 - 2131737 (+)
Gene ID: HRGMv2_2676_1_2011
Type: STP
Location: 2132026 - 2132283 (+)
Type: STP
Location: 2132026 - 2132283 (+)
Gene ID: HRGMv2_2676_1_2012
Type: TC
Location: 2132387 - 2134030 (+)
Type: TC
Location: 2132387 - 2134030 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.