Genome Details
Selected Rep_genome_ID: HRGMv2_2446
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter norwichensis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_2446 | 2,980,050 | 95.59% | 0.487% | South Korea | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2446_CGC10 | CGCFAM_00020 | Yes | 5 | 1 | host glycan/beta-glucan |
| HRGMv2_2446_CGC17 | CGCFAM_00103 | Yes | 5 | 2 | |
| HRGMv2_2446_CGC26 | CGCFAM_00160 | Yes | 4 | 2 | alpha-glucan |
| HRGMv2_2446_CGC34 | CGCFAM_00386 | Yes | 6 | 1 | |
| HRGMv2_2446_CGC21 | CGCFAM_00807 | Yes | 7 | 2 | |
| HRGMv2_2446_CGC8 | CGCFAM_01513 | Yes | 7 | 1 | |
| HRGMv2_2446_CGC37 | CGCFAM_01879 | Yes | 3 | 1 | |
| HRGMv2_2446_CGC19 | CGCFAM_02071 | Yes | 6 | 2 | |
| HRGMv2_2446_CGC32 | CGCFAM_02420 | Yes | 4 | 1 | |
| HRGMv2_2446_CGC30 | CGCFAM_03055 | Yes | 4 | 1 | |
| HRGMv2_2446_CGC18 | CGCFAM_03624 | Yes | 5 | 1 | |
| HRGMv2_2446_CGC23 | CGCFAM_04875 | Yes | 4 | 1 | |
| HRGMv2_2446_CGC24 | CGCFAM_05000 | Yes | 6 | 1 | |
| HRGMv2_2446_CGC27 | CGCFAM_05750 | Yes | 8 | 1 | |
| HRGMv2_2446_CGC4 | CGCFAM_07501 | Yes | 5 | 2 | |
| HRGMv2_2446_CGC13 | CGCFAM_10081 | Yes | 15 | 3 | |
| HRGMv2_2446_CGC16 | CGCFAM_10082 | Yes | 17 | 8 | |
| HRGMv2_2446_CGC3 | CGCFAM_10083 | Yes | 3 | 2 | |
| HRGMv2_2446_CGC35 | CGCFAM_10084 | Yes | 10 | 1 |
Top CAZyme Families