dbCAN Logo

Cluster: HRGMv2_2446_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2446_30 HRGMv2_2446_30_2 317 1705 - 2.A.66.1.32
pfam HRGMv2_2446_30 HRGMv2_2446_30_3 1843 2862 - KARI_C | 2-Hacid_dh_C | NAD_binding_2 | F420_oxidored | KARI_N
STP HRGMv2_2446_30 HRGMv2_2446_30_4 2988 3485 - ACT
TC HRGMv2_2446_30 HRGMv2_2446_30_5 3668 5506 - 3.A.1.120.5
TC HRGMv2_2446_30 HRGMv2_2446_30_6 5577 6941 - 2.A.66.1.32
TC HRGMv2_2446_30 HRGMv2_2446_30_7 7122 8156 - 4.D.2.1.5
NULL(UNKNOWN) HRGMv2_2446_30 HRGMv2_2446_30_8 8146 8766 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2446_30 HRGMv2_2446_30_9 8794 9834 - GT2
Gene ID: HRGMv2_2446_30_2
Type: TC
Location: 317 - 1705 (-)
Gene ID: HRGMv2_2446_30_3
Type: pfam
Location: 1843 - 2862 (-)
Gene ID: HRGMv2_2446_30_4
Type: STP
Location: 2988 - 3485 (-)
Gene ID: HRGMv2_2446_30_5
Type: TC
Location: 3668 - 5506 (-)
Gene ID: HRGMv2_2446_30_6
Type: TC
Location: 5577 - 6941 (-)
Gene ID: HRGMv2_2446_30_7
Type: TC
Location: 7122 - 8156 (-)
Gene ID: HRGMv2_2446_30_8
Type:
Location: 8146 - 8766 (-)
Gene ID: HRGMv2_2446_30_9
Type: CAZyme
Location: 8794 - 9834 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List