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Cluster: HRGMv2_2446_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2446_51 HRGMv2_2446_51_11 9931 10833 - 3.A.1.147.1
CAZyme HRGMv2_2446_51 HRGMv2_2446_51_12 11102 16414 - CBM22 | CBM22 | CBM6 | CBM91 | GH43_10 | GH43_16
TF HRGMv2_2446_51 HRGMv2_2446_51_13 16649 17002 - HTH_5
TC HRGMv2_2446_51 HRGMv2_2446_51_14 17199 17819 - 2.A.115.2.14
TC HRGMv2_2446_51 HRGMv2_2446_51_15 17831 18541 - 3.A.1.4.10
TC HRGMv2_2446_51 HRGMv2_2446_51_16 18554 19315 - 3.A.1.4.10
TC HRGMv2_2446_51 HRGMv2_2446_51_17 19315 20379 - 3.A.1.4.8
TC HRGMv2_2446_51 HRGMv2_2446_51_18 20389 21279 - 3.A.1.4.10
pfam HRGMv2_2446_51 HRGMv2_2446_51_19 21551 22387 - DHquinase_I
TC HRGMv2_2446_51 HRGMv2_2446_51_20 22568 23737 - 3.A.1.4.10
Gene ID: HRGMv2_2446_51_11
Type: TC
Location: 9931 - 10833 (-)
Gene ID: HRGMv2_2446_51_12
Type: CAZyme
Location: 11102 - 16414 (-)
Gene ID: HRGMv2_2446_51_13
Type: TF
Location: 16649 - 17002 (-)
Gene ID: HRGMv2_2446_51_14
Type: TC
Location: 17199 - 17819 (-)
Gene ID: HRGMv2_2446_51_15
Type: TC
Location: 17831 - 18541 (-)
Gene ID: HRGMv2_2446_51_16
Type: TC
Location: 18554 - 19315 (-)
Gene ID: HRGMv2_2446_51_17
Type: TC
Location: 19315 - 20379 (-)
Gene ID: HRGMv2_2446_51_18
Type: TC
Location: 20389 - 21279 (-)
Gene ID: HRGMv2_2446_51_19
Type: pfam
Location: 21551 - 22387 (-)
Gene ID: HRGMv2_2446_51_20
Type: TC
Location: 22568 - 23737 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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