Cluster: HRGMv2_2446_CGC26
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2446
- CGC Family ID: CGCFAM_00160
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2446_27 | HRGMv2_2446_27_20 | 32689 | 33609 | + | GT2 |
| TF | HRGMv2_2446_27 | HRGMv2_2446_27_21 | 33684 | 34457 | - | GntR |
| TC | HRGMv2_2446_27 | HRGMv2_2446_27_22 | 34645 | 36633 | + | 4.A.1.2.13 |
| CAZyme | HRGMv2_2446_27 | HRGMv2_2446_27_23 | 36681 | 38342 | + | GH13_29 |
Gene ID: HRGMv2_2446_27_20
Type: CAZyme
Location: 32689 - 33609 (+)
Type: CAZyme
Location: 32689 - 33609 (+)
Gene ID: HRGMv2_2446_27_21
Type: TF
Location: 33684 - 34457 (-)
Type: TF
Location: 33684 - 34457 (-)
Gene ID: HRGMv2_2446_27_22
Type: TC
Location: 34645 - 36633 (+)
Type: TC
Location: 34645 - 36633 (+)
Gene ID: HRGMv2_2446_27_23
Type: CAZyme
Location: 36681 - 38342 (+)
Type: CAZyme
Location: 36681 - 38342 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter norwichensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.