Cluster: HRGMv2_2446_CGC32
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2446
- CGC Family ID: CGCFAM_02420
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2446_42 | HRGMv2_2446_42_21 | 19420 | 20103 | - | 8.A.3.2.3 |
| pfam | HRGMv2_2446_42 | HRGMv2_2446_42_22 | 20100 | 20846 | - | Wzz |
| pfam | HRGMv2_2446_42 | HRGMv2_2446_42_23 | 20890 | 21609 | - | CpsB_CapC |
| CAZyme | HRGMv2_2446_42 | HRGMv2_2446_42_24 | 21918 | 26111 | - | GH146 |
Gene ID: HRGMv2_2446_42_21
Type: TC
Location: 19420 - 20103 (-)
Type: TC
Location: 19420 - 20103 (-)
Gene ID: HRGMv2_2446_42_22
Type: pfam
Location: 20100 - 20846 (-)
Type: pfam
Location: 20100 - 20846 (-)
Gene ID: HRGMv2_2446_42_23
Type: pfam
Location: 20890 - 21609 (-)
Type: pfam
Location: 20890 - 21609 (-)
Gene ID: HRGMv2_2446_42_24
Type: CAZyme
Location: 21918 - 26111 (-)
Type: CAZyme
Location: 21918 - 26111 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter norwichensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.