Cluster: HRGMv2_2446_CGC34
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2446
- CGC Family ID: CGCFAM_00386
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2446_49 | HRGMv2_2446_49_9 | 7213 | 8601 | + | 2.A.25.1.5 |
| TF | HRGMv2_2446_49 | HRGMv2_2446_49_10 | 8620 | 9288 | + | Trans_reg_C |
| STP | HRGMv2_2446_49 | HRGMv2_2446_49_11 | 9285 | 10316 | + | HATPase_c |
| TC | HRGMv2_2446_49 | HRGMv2_2446_49_12 | 10555 | 11322 | + | 3.A.1.134.12 |
| TC | HRGMv2_2446_49 | HRGMv2_2446_49_13 | 11312 | 13372 | + | 3.A.1.134.12 |
| CAZyme | HRGMv2_2446_49 | HRGMv2_2446_49_14 | 13523 | 14569 | + | CE1 |
Gene ID: HRGMv2_2446_49_9
Type: TC
Location: 7213 - 8601 (+)
Type: TC
Location: 7213 - 8601 (+)
Gene ID: HRGMv2_2446_49_10
Type: TF
Location: 8620 - 9288 (+)
Type: TF
Location: 8620 - 9288 (+)
Gene ID: HRGMv2_2446_49_11
Type: STP
Location: 9285 - 10316 (+)
Type: STP
Location: 9285 - 10316 (+)
Gene ID: HRGMv2_2446_49_12
Type: TC
Location: 10555 - 11322 (+)
Type: TC
Location: 10555 - 11322 (+)
Gene ID: HRGMv2_2446_49_13
Type: TC
Location: 11312 - 13372 (+)
Type: TC
Location: 11312 - 13372 (+)
Gene ID: HRGMv2_2446_49_14
Type: CAZyme
Location: 13523 - 14569 (+)
Type: CAZyme
Location: 13523 - 14569 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter norwichensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.