Cluster: HRGMv2_2446_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2446
- CGC Family ID: CGCFAM_00103
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2446_17 | HRGMv2_2446_17_5 | 9911 | 11239 | - | 3.A.1.1.34 |
| CAZyme | HRGMv2_2446_17 | HRGMv2_2446_17_6 | 11408 | 12919 | - | GH51_1 |
| TC | HRGMv2_2446_17 | HRGMv2_2446_17_7 | 12968 | 13813 | - | 3.A.1.1.34 |
| TC | HRGMv2_2446_17 | HRGMv2_2446_17_8 | 13813 | 14712 | - | 3.A.1.1.34 |
| CAZyme | HRGMv2_2446_17 | HRGMv2_2446_17_9 | 14726 | 16678 | - | GH127 |
Gene ID: HRGMv2_2446_17_5
Type: TC
Location: 9911 - 11239 (-)
Type: TC
Location: 9911 - 11239 (-)
Gene ID: HRGMv2_2446_17_6
Type: CAZyme
Location: 11408 - 12919 (-)
Type: CAZyme
Location: 11408 - 12919 (-)
Gene ID: HRGMv2_2446_17_7
Type: TC
Location: 12968 - 13813 (-)
Type: TC
Location: 12968 - 13813 (-)
Gene ID: HRGMv2_2446_17_8
Type: TC
Location: 13813 - 14712 (-)
Type: TC
Location: 13813 - 14712 (-)
Gene ID: HRGMv2_2446_17_9
Type: CAZyme
Location: 14726 - 16678 (-)
Type: CAZyme
Location: 14726 - 16678 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter norwichensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.