Cluster: HRGMv2_2446_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2446
- CGC Family ID: CGCFAM_04875
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2446_26 | HRGMv2_2446_26_32 | 36354 | 37283 | - | 3.A.1.105.9 |
| STP | HRGMv2_2446_26 | HRGMv2_2446_26_33 | 37507 | 38607 | + | HATPase_c |
| TF | HRGMv2_2446_26 | HRGMv2_2446_26_34 | 38585 | 39211 | + | GerE |
| CAZyme | HRGMv2_2446_26 | HRGMv2_2446_26_35 | 39233 | 41350 | + | GH13_11 |
Gene ID: HRGMv2_2446_26_32
Type: TC
Location: 36354 - 37283 (-)
Type: TC
Location: 36354 - 37283 (-)
Gene ID: HRGMv2_2446_26_33
Type: STP
Location: 37507 - 38607 (+)
Type: STP
Location: 37507 - 38607 (+)
Gene ID: HRGMv2_2446_26_34
Type: TF
Location: 38585 - 39211 (+)
Type: TF
Location: 38585 - 39211 (+)
Gene ID: HRGMv2_2446_26_35
Type: CAZyme
Location: 39233 - 41350 (+)
Type: CAZyme
Location: 39233 - 41350 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter norwichensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.