Cluster: HRGMv2_2446_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2446
- CGC Family ID: CGCFAM_07501
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2446_4 | HRGMv2_2446_4_32 | 35622 | 37982 | - | GH31_3 |
| CAZyme | HRGMv2_2446_4 | HRGMv2_2446_4_33 | 38001 | 40406 | - | GH3 |
| STP | HRGMv2_2446_4 | HRGMv2_2446_4_34 | 40482 | 41444 | - | Peripla_BP_1 |
| TC | HRGMv2_2446_4 | HRGMv2_2446_4_35 | 41478 | 42425 | - | 3.A.1.2.1 |
| TC | HRGMv2_2446_4 | HRGMv2_2446_4_36 | 42422 | 43918 | - | 3.A.1.2.20 |
Gene ID: HRGMv2_2446_4_32
Type: CAZyme
Location: 35622 - 37982 (-)
Type: CAZyme
Location: 35622 - 37982 (-)
Gene ID: HRGMv2_2446_4_33
Type: CAZyme
Location: 38001 - 40406 (-)
Type: CAZyme
Location: 38001 - 40406 (-)
Gene ID: HRGMv2_2446_4_34
Type: STP
Location: 40482 - 41444 (-)
Type: STP
Location: 40482 - 41444 (-)
Gene ID: HRGMv2_2446_4_35
Type: TC
Location: 41478 - 42425 (-)
Type: TC
Location: 41478 - 42425 (-)
Gene ID: HRGMv2_2446_4_36
Type: TC
Location: 42422 - 43918 (-)
Type: TC
Location: 42422 - 43918 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter norwichensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.