Cluster: HRGMv2_2446_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2446
- CGC Family ID: CGCFAM_10083
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2446_2 | HRGMv2_2446_2_13 | 16196 | 21025 | - | CBM67 | GH78 |
| CAZyme | HRGMv2_2446_2 | HRGMv2_2446_2_14 | 21235 | 22644 | - | GH32 |
| TC | HRGMv2_2446_2 | HRGMv2_2446_2_15 | 22723 | 24669 | - | 4.A.1.2.1 |
Gene ID: HRGMv2_2446_2_13
Type: CAZyme
Location: 16196 - 21025 (-)
Type: CAZyme
Location: 16196 - 21025 (-)
Gene ID: HRGMv2_2446_2_14
Type: CAZyme
Location: 21235 - 22644 (-)
Type: CAZyme
Location: 21235 - 22644 (-)
Gene ID: HRGMv2_2446_2_15
Type: TC
Location: 22723 - 24669 (-)
Type: TC
Location: 22723 - 24669 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter norwichensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.