Cluster: HRGMv2_2446_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2446
- CGC Family ID: CGCFAM_05000
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2446_27 | HRGMv2_2446_27_3 | 1885 | 3969 | - | GH127 |
| TC | HRGMv2_2446_27 | HRGMv2_2446_27_4 | 3947 | 5644 | - | 8.A.59.2.1 |
| TF | HRGMv2_2446_27 | HRGMv2_2446_27_5 | 5628 | 7187 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2446_27 | HRGMv2_2446_27_6 | 7193 | 8023 | - | 3.A.1.1.47 |
| TC | HRGMv2_2446_27 | HRGMv2_2446_27_7 | 8013 | 8882 | - | 3.A.1.1.18 |
| TC | HRGMv2_2446_27 | HRGMv2_2446_27_8 | 8964 | 10250 | - | 3.A.1.1.20 |
Gene ID: HRGMv2_2446_27_3
Type: CAZyme
Location: 1885 - 3969 (-)
Type: CAZyme
Location: 1885 - 3969 (-)
Gene ID: HRGMv2_2446_27_4
Type: TC
Location: 3947 - 5644 (-)
Type: TC
Location: 3947 - 5644 (-)
Gene ID: HRGMv2_2446_27_5
Type: TF
Location: 5628 - 7187 (-)
Type: TF
Location: 5628 - 7187 (-)
Gene ID: HRGMv2_2446_27_6
Type: TC
Location: 7193 - 8023 (-)
Type: TC
Location: 7193 - 8023 (-)
Gene ID: HRGMv2_2446_27_7
Type: TC
Location: 8013 - 8882 (-)
Type: TC
Location: 8013 - 8882 (-)
Gene ID: HRGMv2_2446_27_8
Type: TC
Location: 8964 - 10250 (-)
Type: TC
Location: 8964 - 10250 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter norwichensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.