Cluster: HRGMv2_2446_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2446
- CGC Family ID: CGCFAM_03624
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2446_17 | HRGMv2_2446_17_22 | 35767 | 36423 | - | 2.A.38.4.6 |
| TC | HRGMv2_2446_17 | HRGMv2_2446_17_23 | 36520 | 37905 | - | 2.A.38.4.1 |
| TF | HRGMv2_2446_17 | HRGMv2_2446_17_24 | 38087 | 38779 | - | Trans_reg_C |
| STP | HRGMv2_2446_17 | HRGMv2_2446_17_25 | 38772 | 39827 | - | HATPase_c | HisKA |
| CAZyme | HRGMv2_2446_17 | HRGMv2_2446_17_26 | 40127 | 45376 | - | GH146 |
Gene ID: HRGMv2_2446_17_22
Type: TC
Location: 35767 - 36423 (-)
Type: TC
Location: 35767 - 36423 (-)
Gene ID: HRGMv2_2446_17_23
Type: TC
Location: 36520 - 37905 (-)
Type: TC
Location: 36520 - 37905 (-)
Gene ID: HRGMv2_2446_17_24
Type: TF
Location: 38087 - 38779 (-)
Type: TF
Location: 38087 - 38779 (-)
Gene ID: HRGMv2_2446_17_25
Type: STP
Location: 38772 - 39827 (-)
Type: STP
Location: 38772 - 39827 (-)
Gene ID: HRGMv2_2446_17_26
Type: CAZyme
Location: 40127 - 45376 (-)
Type: CAZyme
Location: 40127 - 45376 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter norwichensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.