dbCAN Logo

Genome Details

Selected Rep_genome_ID: A111.bin_36
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
Erysipelotrichales
→
Family
Erysipelotrichaceae
→
Genus
Holdemania
→
Species
Holdemania massiliensis
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
A111.bin_36 3,742,603 100% 1.27% China(Inner Mongolia) Asia IMGG
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
A111.bin_36_CGC35 CGCFAM_00012 Yes 8 3 host glycan/beta-glucan
A111.bin_36_CGC33 CGCFAM_00020 Yes 4 1 host glycan/beta-glucan
A111.bin_36_CGC36 CGCFAM_00020 Yes 4 1 host glycan/beta-glucan
A111.bin_36_CGC12 CGCFAM_00056 Yes 5 2
A111.bin_36_CGC23 CGCFAM_00057 Yes 7 2
A111.bin_36_CGC41 CGCFAM_00140 Yes 6 3
A111.bin_36_CGC19 CGCFAM_00176 Yes 6 1 beta-glucan
A111.bin_36_CGC5 CGCFAM_00176 Yes 6 1 beta-glucan
A111.bin_36_CGC30 CGCFAM_00178 Yes 7 4
A111.bin_36_CGC21 CGCFAM_00264 Yes 10 3
A111.bin_36_CGC31 CGCFAM_00280 Yes 3 1
A111.bin_36_CGC32 CGCFAM_00315 Yes 4 1
A111.bin_36_CGC38 CGCFAM_00343 Yes 5 1
A111.bin_36_CGC17 CGCFAM_00545 Yes 5 1
A111.bin_36_CGC24 CGCFAM_00545 Yes 7 1
A111.bin_36_CGC3 CGCFAM_00545 Yes 7 1
A111.bin_36_CGC18 CGCFAM_00652 Yes 4 2
A111.bin_36_CGC10 CGCFAM_01263 Yes 4 1
A111.bin_36_CGC13 CGCFAM_01264 Yes 3 1
A111.bin_36_CGC22 CGCFAM_01512 Yes 5 1
A111.bin_36_CGC43 CGCFAM_02317 Yes 4 2
A111.bin_36_CGC39 CGCFAM_02983 Yes 4 1
A111.bin_36_CGC42 CGCFAM_04238 Yes 7 1
A111.bin_36_CGC15 CGCFAM_06531 Yes 7 2
A111.bin_36_CGC16 CGCFAM_06532 Yes 6 1
Top CAZyme Families