Cluster: A111.bin_36_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A111.bin_36
- CGC Family ID: CGCFAM_01512
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A111_contig_2239 | A111_contig_2239_171 | 190950 | 191741 | - | 3.A.1.34.1 |
| TC | A111_contig_2239 | A111_contig_2239_172 | 191734 | 192612 | - | 3.A.1.34.1 |
| TC | A111_contig_2239 | A111_contig_2239_173 | 192639 | 193628 | - | 3.A.1.34.1 |
| NULL(UNKNOWN) | A111_contig_2239 | A111_contig_2239_174 | 193708 | 194001 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A111_contig_2239 | A111_contig_2239_175 | 194296 | 196797 | + | GT51 |
Gene ID: A111_contig_2239_171
Type: TC
Location: 190950 - 191741 (-)
Type: TC
Location: 190950 - 191741 (-)
Gene ID: A111_contig_2239_172
Type: TC
Location: 191734 - 192612 (-)
Type: TC
Location: 191734 - 192612 (-)
Gene ID: A111_contig_2239_173
Type: TC
Location: 192639 - 193628 (-)
Type: TC
Location: 192639 - 193628 (-)
Gene ID: A111_contig_2239_174
Type:
Location: 193708 - 194001 (-)
Type:
Location: 193708 - 194001 (-)
Gene ID: A111_contig_2239_175
Type: CAZyme
Location: 194296 - 196797 (+)
Type: CAZyme
Location: 194296 - 196797 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.