Cluster: A111.bin_36_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: A111.bin_36
- CGC Family ID: CGCFAM_06531
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_562 | A111_contig_562_235 | 233501 | 234676 | - | CE9 |
| CAZyme | A111_contig_562 | A111_contig_562_236 | 234673 | 235887 | - | CE9 |
| TC | A111_contig_562 | A111_contig_562_237 | 236147 | 236962 | - | 4.A.6.1.19 |
| TC | A111_contig_562 | A111_contig_562_238 | 236962 | 237756 | - | 4.A.6.1.19 |
| TC | A111_contig_562 | A111_contig_562_239 | 237772 | 238263 | - | 4.A.6.1.1 |
| TF | A111_contig_562 | A111_contig_562_240 | 238505 | 240508 | - | HTH_11 | Mga |
| TC | A111_contig_562 | A111_contig_562_241 | 240551 | 241942 | - | 2.A.66.1.32 |
Gene ID: A111_contig_562_235
Type: CAZyme
Location: 233501 - 234676 (-)
Type: CAZyme
Location: 233501 - 234676 (-)
Gene ID: A111_contig_562_236
Type: CAZyme
Location: 234673 - 235887 (-)
Type: CAZyme
Location: 234673 - 235887 (-)
Gene ID: A111_contig_562_237
Type: TC
Location: 236147 - 236962 (-)
Type: TC
Location: 236147 - 236962 (-)
Gene ID: A111_contig_562_238
Type: TC
Location: 236962 - 237756 (-)
Type: TC
Location: 236962 - 237756 (-)
Gene ID: A111_contig_562_239
Type: TC
Location: 237772 - 238263 (-)
Type: TC
Location: 237772 - 238263 (-)
Gene ID: A111_contig_562_240
Type: TF
Location: 238505 - 240508 (-)
Type: TF
Location: 238505 - 240508 (-)
Gene ID: A111_contig_562_241
Type: TC
Location: 240551 - 241942 (-)
Type: TC
Location: 240551 - 241942 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.