Cluster: A111.bin_36_CGC41
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: A111.bin_36
- CGC Family ID: CGCFAM_00140
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_1748 | A111_contig_1748_23 | 30947 | 31612 | - | GT2 |
| pfam | A111_contig_1748 | A111_contig_1748_24 | 31948 | 33393 | - | Polysacc_synt |
| CAZyme | A111_contig_1748 | A111_contig_1748_25 | 33394 | 34395 | - | GT2 |
| NULL(UNKNOWN) | A111_contig_1748 | A111_contig_1748_26 | 35213 | 36598 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A111_contig_1748 | A111_contig_1748_27 | 36758 | 37804 | - | 9.B.18.2.1 |
| CAZyme | A111_contig_1748 | A111_contig_1748_28 | 38049 | 40235 | + | GH9 |
Gene ID: A111_contig_1748_23
Type: CAZyme
Location: 30947 - 31612 (-)
Type: CAZyme
Location: 30947 - 31612 (-)
Gene ID: A111_contig_1748_24
Type: pfam
Location: 31948 - 33393 (-)
Type: pfam
Location: 31948 - 33393 (-)
Gene ID: A111_contig_1748_25
Type: CAZyme
Location: 33394 - 34395 (-)
Type: CAZyme
Location: 33394 - 34395 (-)
Gene ID: A111_contig_1748_26
Type:
Location: 35213 - 36598 (-)
Type:
Location: 35213 - 36598 (-)
Gene ID: A111_contig_1748_27
Type: TC
Location: 36758 - 37804 (-)
Type: TC
Location: 36758 - 37804 (-)
Gene ID: A111_contig_1748_28
Type: CAZyme
Location: 38049 - 40235 (+)
Type: CAZyme
Location: 38049 - 40235 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.