Cluster: A111.bin_36_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: A111.bin_36
- CGC Family ID: CGCFAM_00056
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_468 | A111_contig_468_79 | 78957 | 79835 | + | GT2 |
| TF | A111_contig_468 | A111_contig_468_80 | 79912 | 80616 | + | Trans_reg_C |
| STP | A111_contig_468 | A111_contig_468_81 | 80621 | 82870 | + | HATPase_c | HisKA |
| TC | A111_contig_468 | A111_contig_468_82 | 83092 | 84945 | + | 4.A.1.2.11 |
| CAZyme | A111_contig_468 | A111_contig_468_83 | 84947 | 86419 | + | GH1 |
Gene ID: A111_contig_468_79
Type: CAZyme
Location: 78957 - 79835 (+)
Type: CAZyme
Location: 78957 - 79835 (+)
Gene ID: A111_contig_468_80
Type: TF
Location: 79912 - 80616 (+)
Type: TF
Location: 79912 - 80616 (+)
Gene ID: A111_contig_468_81
Type: STP
Location: 80621 - 82870 (+)
Type: STP
Location: 80621 - 82870 (+)
Gene ID: A111_contig_468_82
Type: TC
Location: 83092 - 84945 (+)
Type: TC
Location: 83092 - 84945 (+)
Gene ID: A111_contig_468_83
Type: CAZyme
Location: 84947 - 86419 (+)
Type: CAZyme
Location: 84947 - 86419 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.