Cluster: A111.bin_36_CGC24
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: A111.bin_36
- CGC Family ID: CGCFAM_00545
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A111_contig_2691 | A111_contig_2691_24 | 23421 | 26222 | + | 3.A.23.1.1 |
| TC | A111_contig_2691 | A111_contig_2691_25 | 26365 | 26865 | + | 4.A.6.1.3 |
| TC | A111_contig_2691 | A111_contig_2691_26 | 26884 | 27690 | + | 4.A.6.1.22 |
| TC | A111_contig_2691 | A111_contig_2691_27 | 27687 | 28511 | + | 4.A.6.1.19 |
| TC | A111_contig_2691 | A111_contig_2691_28 | 28515 | 28934 | + | 4.A.6.1.19 |
| CAZyme | A111_contig_2691 | A111_contig_2691_29 | 28991 | 30184 | + | CE9 |
| TC | A111_contig_2691 | A111_contig_2691_30 | 30376 | 35028 | - | 9.B.34.1.3 |
Gene ID: A111_contig_2691_24
Type: TC
Location: 23421 - 26222 (+)
Type: TC
Location: 23421 - 26222 (+)
Gene ID: A111_contig_2691_25
Type: TC
Location: 26365 - 26865 (+)
Type: TC
Location: 26365 - 26865 (+)
Gene ID: A111_contig_2691_26
Type: TC
Location: 26884 - 27690 (+)
Type: TC
Location: 26884 - 27690 (+)
Gene ID: A111_contig_2691_27
Type: TC
Location: 27687 - 28511 (+)
Type: TC
Location: 27687 - 28511 (+)
Gene ID: A111_contig_2691_28
Type: TC
Location: 28515 - 28934 (+)
Type: TC
Location: 28515 - 28934 (+)
Gene ID: A111_contig_2691_29
Type: CAZyme
Location: 28991 - 30184 (+)
Type: CAZyme
Location: 28991 - 30184 (+)
Gene ID: A111_contig_2691_30
Type: TC
Location: 30376 - 35028 (-)
Type: TC
Location: 30376 - 35028 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.