Cluster: A111.bin_36_CGC38
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A111.bin_36
- CGC Family ID: CGCFAM_00343
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_2690 | A111_contig_2690_358 | 390845 | 392254 | + | GH1 |
| TC | A111_contig_2690 | A111_contig_2690_359 | 392286 | 393647 | + | 2.A.66.1.33 |
| pfam | A111_contig_2690 | A111_contig_2690_360 | 393644 | 394108 | + | DUF3284 |
| TC | A111_contig_2690 | A111_contig_2690_361 | 394305 | 395582 | + | 4.A.3.2.3 |
| TC | A111_contig_2690 | A111_contig_2690_362 | 395598 | 395900 | + | 4.A.3.2.9 |
Gene ID: A111_contig_2690_358
Type: CAZyme
Location: 390845 - 392254 (+)
Type: CAZyme
Location: 390845 - 392254 (+)
Gene ID: A111_contig_2690_359
Type: TC
Location: 392286 - 393647 (+)
Type: TC
Location: 392286 - 393647 (+)
Gene ID: A111_contig_2690_360
Type: pfam
Location: 393644 - 394108 (+)
Type: pfam
Location: 393644 - 394108 (+)
Gene ID: A111_contig_2690_361
Type: TC
Location: 394305 - 395582 (+)
Type: TC
Location: 394305 - 395582 (+)
Gene ID: A111_contig_2690_362
Type: TC
Location: 395598 - 395900 (+)
Type: TC
Location: 395598 - 395900 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.