Cluster: A111.bin_36_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: A111.bin_36
- CGC Family ID: CGCFAM_00652
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A111_contig_562 | A111_contig_562_488 | 506598 | 507965 | - | 2.A.66.1.33 |
| pfam | A111_contig_562 | A111_contig_562_489 | 507980 | 508912 | - | Mem_trans | Mem_trans |
| CAZyme | A111_contig_562 | A111_contig_562_490 | 509004 | 510416 | - | GH1 |
| CAZyme | A111_contig_562 | A111_contig_562_491 | 510419 | 511828 | - | GH1 |
Gene ID: A111_contig_562_488
Type: TC
Location: 506598 - 507965 (-)
Type: TC
Location: 506598 - 507965 (-)
Gene ID: A111_contig_562_489
Type: pfam
Location: 507980 - 508912 (-)
Type: pfam
Location: 507980 - 508912 (-)
Gene ID: A111_contig_562_490
Type: CAZyme
Location: 509004 - 510416 (-)
Type: CAZyme
Location: 509004 - 510416 (-)
Gene ID: A111_contig_562_491
Type: CAZyme
Location: 510419 - 511828 (-)
Type: CAZyme
Location: 510419 - 511828 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.