Cluster: A111.bin_36_CGC39
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A111.bin_36
- CGC Family ID: CGCFAM_02983
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_1098 | A111_contig_1098_8 | 7594 | 9789 | - | GH123 |
| TF | A111_contig_1098 | A111_contig_1098_9 | 10046 | 10519 | + | MarR |
| pfam | A111_contig_1098 | A111_contig_1098_10 | 10680 | 11288 | + | Hexapep | Mac | Hexapep_2 |
| TC | A111_contig_1098 | A111_contig_1098_11 | 11508 | 12854 | + | 2.A.66.1.28 |
Gene ID: A111_contig_1098_8
Type: CAZyme
Location: 7594 - 9789 (-)
Type: CAZyme
Location: 7594 - 9789 (-)
Gene ID: A111_contig_1098_9
Type: TF
Location: 10046 - 10519 (+)
Type: TF
Location: 10046 - 10519 (+)
Gene ID: A111_contig_1098_10
Type: pfam
Location: 10680 - 11288 (+)
Type: pfam
Location: 10680 - 11288 (+)
Gene ID: A111_contig_1098_11
Type: TC
Location: 11508 - 12854 (+)
Type: TC
Location: 11508 - 12854 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.