Cluster: A111.bin_36_CGC42
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: A111.bin_36
- CGC Family ID: CGCFAM_04238
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A111_contig_1748 | A111_contig_1748_52 | 74149 | 75732 | - | 4.A.6.1.16 |
| TC | A111_contig_1748 | A111_contig_1748_53 | 75753 | 76244 | - | 4.A.6.1.12 |
| pfam | A111_contig_1748 | A111_contig_1748_54 | 76247 | 76978 | - | Amidohydro_2 |
| TC | A111_contig_1748 | A111_contig_1748_55 | 77201 | 79111 | - | 4.A.3.2.2 |
| peptidase | A111_contig_1748 | A111_contig_1748_56 | 79350 | 80078 | - | S09.UPW |
| pfam | A111_contig_1748 | A111_contig_1748_57 | 80075 | 80812 | - | SpoU_methylase | MRM3-like_sub_bind |
| CAZyme | A111_contig_1748 | A111_contig_1748_58 | 80912 | 82306 | - | CE4 |
Gene ID: A111_contig_1748_52
Type: TC
Location: 74149 - 75732 (-)
Type: TC
Location: 74149 - 75732 (-)
Gene ID: A111_contig_1748_53
Type: TC
Location: 75753 - 76244 (-)
Type: TC
Location: 75753 - 76244 (-)
Gene ID: A111_contig_1748_54
Type: pfam
Location: 76247 - 76978 (-)
Type: pfam
Location: 76247 - 76978 (-)
Gene ID: A111_contig_1748_55
Type: TC
Location: 77201 - 79111 (-)
Type: TC
Location: 77201 - 79111 (-)
Gene ID: A111_contig_1748_56
Type: peptidase
Location: 79350 - 80078 (-)
Type: peptidase
Location: 79350 - 80078 (-)
Gene ID: A111_contig_1748_57
Type: pfam
Location: 80075 - 80812 (-)
Type: pfam
Location: 80075 - 80812 (-)
Gene ID: A111_contig_1748_58
Type: CAZyme
Location: 80912 - 82306 (-)
Type: CAZyme
Location: 80912 - 82306 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.