Cluster: A111.bin_36_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A111.bin_36
- CGC Family ID: CGCFAM_01263
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A111_contig_2692 | A111_contig_2692_372 | 412460 | 413677 | - | 3.A.1.122.2 |
| pfam | A111_contig_2692 | A111_contig_2692_373 | 413690 | 415399 | - | HlyD_3 | HlyD_D23 |
| TC | A111_contig_2692 | A111_contig_2692_374 | 415402 | 416100 | - | 3.A.1.122.7 |
| CAZyme | A111_contig_2692 | A111_contig_2692_375 | 416939 | 418336 | - | AA4 |
Gene ID: A111_contig_2692_372
Type: TC
Location: 412460 - 413677 (-)
Type: TC
Location: 412460 - 413677 (-)
Gene ID: A111_contig_2692_373
Type: pfam
Location: 413690 - 415399 (-)
Type: pfam
Location: 413690 - 415399 (-)
Gene ID: A111_contig_2692_374
Type: TC
Location: 415402 - 416100 (-)
Type: TC
Location: 415402 - 416100 (-)
Gene ID: A111_contig_2692_375
Type: CAZyme
Location: 416939 - 418336 (-)
Type: CAZyme
Location: 416939 - 418336 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.