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Cluster: A111.bin_36_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A111_contig_2239 A111_contig_2239_61 63879 65318 - GH1
pfam A111_contig_2239 A111_contig_2239_62 65336 65638 - PTS_IIA
TC A111_contig_2239 A111_contig_2239_63 65635 65940 - 4.A.3.2.6
TC A111_contig_2239 A111_contig_2239_64 65979 67268 - 4.A.3.2.3
TF A111_contig_2239 A111_contig_2239_65 67472 68266 + HTH_6
TF A111_contig_2239 A111_contig_2239_66 68263 69060 + HTH_6
CAZyme A111_contig_2239 A111_contig_2239_67 69116 70564 - GH1
NULL(UNKNOWN) A111_contig_2239 A111_contig_2239_68 70758 71870 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) A111_contig_2239 A111_contig_2239_69 72998 73165 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A111_contig_2239 A111_contig_2239_70 73556 74986 - GH1
Gene ID: A111_contig_2239_61
Type: CAZyme
Location: 63879 - 65318 (-)
Gene ID: A111_contig_2239_62
Type: pfam
Location: 65336 - 65638 (-)
Gene ID: A111_contig_2239_63
Type: TC
Location: 65635 - 65940 (-)
Gene ID: A111_contig_2239_64
Type: TC
Location: 65979 - 67268 (-)
Gene ID: A111_contig_2239_65
Type: TF
Location: 67472 - 68266 (+)
Gene ID: A111_contig_2239_66
Type: TF
Location: 68263 - 69060 (+)
Gene ID: A111_contig_2239_67
Type: CAZyme
Location: 69116 - 70564 (-)
Gene ID: A111_contig_2239_68
Type:
Location: 70758 - 71870 (-)
Gene ID: A111_contig_2239_69
Type:
Location: 72998 - 73165 (-)
Gene ID: A111_contig_2239_70
Type: CAZyme
Location: 73556 - 74986 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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