Cluster: A111.bin_36_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A111.bin_36
- CGC Family ID: CGCFAM_06532
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A111_contig_562 | A111_contig_562_259 | 267522 | 269870 | - | 3.A.5.1.3 |
| TF | A111_contig_562 | A111_contig_562_260 | 269958 | 270137 | - | CSD |
| STP | A111_contig_562 | A111_contig_562_261 | 270520 | 271185 | - | Pribosyltran |
| TC | A111_contig_562 | A111_contig_562_262 | 271172 | 272320 | - | 3.A.11.1.2 |
| CAZyme | A111_contig_562 | A111_contig_562_263 | 272444 | 274225 | + | GH35 |
| TC | A111_contig_562 | A111_contig_562_264 | 274384 | 275700 | - | 1.I.1.1.3 |
Gene ID: A111_contig_562_259
Type: TC
Location: 267522 - 269870 (-)
Type: TC
Location: 267522 - 269870 (-)
Gene ID: A111_contig_562_260
Type: TF
Location: 269958 - 270137 (-)
Type: TF
Location: 269958 - 270137 (-)
Gene ID: A111_contig_562_261
Type: STP
Location: 270520 - 271185 (-)
Type: STP
Location: 270520 - 271185 (-)
Gene ID: A111_contig_562_262
Type: TC
Location: 271172 - 272320 (-)
Type: TC
Location: 271172 - 272320 (-)
Gene ID: A111_contig_562_263
Type: CAZyme
Location: 272444 - 274225 (+)
Type: CAZyme
Location: 272444 - 274225 (+)
Gene ID: A111_contig_562_264
Type: TC
Location: 274384 - 275700 (-)
Type: TC
Location: 274384 - 275700 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.