Cluster: A111.bin_36_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: A111.bin_36
- CGC Family ID: CGCFAM_00176
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A111_contig_1087 | A111_contig_1087_104 | 89172 | 89987 | - | 8.A.5.1.4 |
| TC | A111_contig_1087 | A111_contig_1087_105 | 90003 | 90335 | - | 4.A.3.2.2 |
| TF | A111_contig_1087 | A111_contig_1087_106 | 90349 | 92265 | - | HTH_11 | Mga |
| TC | A111_contig_1087 | A111_contig_1087_107 | 92543 | 93883 | - | 4.A.3.2.9 |
| pfam | A111_contig_1087 | A111_contig_1087_108 | 93910 | 94209 | - | PTS_IIB |
| CAZyme | A111_contig_1087 | A111_contig_1087_109 | 94231 | 95730 | - | GH1 |
Gene ID: A111_contig_1087_104
Type: TC
Location: 89172 - 89987 (-)
Type: TC
Location: 89172 - 89987 (-)
Gene ID: A111_contig_1087_105
Type: TC
Location: 90003 - 90335 (-)
Type: TC
Location: 90003 - 90335 (-)
Gene ID: A111_contig_1087_106
Type: TF
Location: 90349 - 92265 (-)
Type: TF
Location: 90349 - 92265 (-)
Gene ID: A111_contig_1087_107
Type: TC
Location: 92543 - 93883 (-)
Type: TC
Location: 92543 - 93883 (-)
Gene ID: A111_contig_1087_108
Type: pfam
Location: 93910 - 94209 (-)
Type: pfam
Location: 93910 - 94209 (-)
Gene ID: A111_contig_1087_109
Type: CAZyme
Location: 94231 - 95730 (-)
Type: CAZyme
Location: 94231 - 95730 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.