Cluster: A111.bin_36_CGC30
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: A111.bin_36
- CGC Family ID: CGCFAM_00178
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_3153 | A111_contig_3153_285 | 314568 | 316664 | - | GH43_20 |
| NULL(UNKNOWN) | A111_contig_3153 | A111_contig_3153_286 | 316661 | 318205 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A111_contig_3153 | A111_contig_3153_287 | 318220 | 319179 | - | GT2 |
| pfam | A111_contig_3153 | A111_contig_3153_288 | 319211 | 321733 | - | YfhO |
| CAZyme | A111_contig_3153 | A111_contig_3153_289 | 321738 | 322760 | - | GT2 |
| CAZyme | A111_contig_3153 | A111_contig_3153_290 | 322796 | 323773 | - | GT2 |
| TC | A111_contig_3153 | A111_contig_3153_291 | 323766 | 325220 | - | 2.A.66.2.16 |
Gene ID: A111_contig_3153_285
Type: CAZyme
Location: 314568 - 316664 (-)
Type: CAZyme
Location: 314568 - 316664 (-)
Gene ID: A111_contig_3153_286
Type:
Location: 316661 - 318205 (-)
Type:
Location: 316661 - 318205 (-)
Gene ID: A111_contig_3153_287
Type: CAZyme
Location: 318220 - 319179 (-)
Type: CAZyme
Location: 318220 - 319179 (-)
Gene ID: A111_contig_3153_288
Type: pfam
Location: 319211 - 321733 (-)
Type: pfam
Location: 319211 - 321733 (-)
Gene ID: A111_contig_3153_289
Type: CAZyme
Location: 321738 - 322760 (-)
Type: CAZyme
Location: 321738 - 322760 (-)
Gene ID: A111_contig_3153_290
Type: CAZyme
Location: 322796 - 323773 (-)
Type: CAZyme
Location: 322796 - 323773 (-)
Gene ID: A111_contig_3153_291
Type: TC
Location: 323766 - 325220 (-)
Type: TC
Location: 323766 - 325220 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.