Cluster: A111.bin_36_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A111.bin_36
- CGC Family ID: CGCFAM_00545
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_562 | A111_contig_562_380 | 391299 | 392414 | - | CE9 |
| pfam | A111_contig_562 | A111_contig_562_381 | 392411 | 393043 | - | DUF6198 |
| TC | A111_contig_562 | A111_contig_562_382 | 393045 | 393863 | - | 4.A.6.1.19 |
| TC | A111_contig_562 | A111_contig_562_383 | 393865 | 394656 | - | 4.A.6.1.19 |
| TC | A111_contig_562 | A111_contig_562_384 | 394657 | 395163 | - | 4.A.6.1.3 |
Gene ID: A111_contig_562_380
Type: CAZyme
Location: 391299 - 392414 (-)
Type: CAZyme
Location: 391299 - 392414 (-)
Gene ID: A111_contig_562_381
Type: pfam
Location: 392411 - 393043 (-)
Type: pfam
Location: 392411 - 393043 (-)
Gene ID: A111_contig_562_382
Type: TC
Location: 393045 - 393863 (-)
Type: TC
Location: 393045 - 393863 (-)
Gene ID: A111_contig_562_383
Type: TC
Location: 393865 - 394656 (-)
Type: TC
Location: 393865 - 394656 (-)
Gene ID: A111_contig_562_384
Type: TC
Location: 394657 - 395163 (-)
Type: TC
Location: 394657 - 395163 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.