Cluster: A111.bin_36_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: A111.bin_36
- CGC Family ID: CGCFAM_00176
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_2692 | A111_contig_2692_28 | 23809 | 25260 | - | GH1 |
| TC | A111_contig_2692 | A111_contig_2692_29 | 25264 | 25638 | - | 4.A.3.1.2 |
| TC | A111_contig_2692 | A111_contig_2692_30 | 25671 | 26924 | - | 4.A.3.2.8 |
| TC | A111_contig_2692 | A111_contig_2692_31 | 26943 | 27287 | - | 4.A.3.2.3 |
| TF | A111_contig_2692 | A111_contig_2692_32 | 27477 | 29372 | + | HTH_11 | Mga |
| TC | A111_contig_2692 | A111_contig_2692_33 | 29523 | 30095 | - | 2.A.115.2.14 |
Gene ID: A111_contig_2692_28
Type: CAZyme
Location: 23809 - 25260 (-)
Type: CAZyme
Location: 23809 - 25260 (-)
Gene ID: A111_contig_2692_29
Type: TC
Location: 25264 - 25638 (-)
Type: TC
Location: 25264 - 25638 (-)
Gene ID: A111_contig_2692_30
Type: TC
Location: 25671 - 26924 (-)
Type: TC
Location: 25671 - 26924 (-)
Gene ID: A111_contig_2692_31
Type: TC
Location: 26943 - 27287 (-)
Type: TC
Location: 26943 - 27287 (-)
Gene ID: A111_contig_2692_32
Type: TF
Location: 27477 - 29372 (+)
Type: TF
Location: 27477 - 29372 (+)
Gene ID: A111_contig_2692_33
Type: TC
Location: 29523 - 30095 (-)
Type: TC
Location: 29523 - 30095 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Species
Holdemania massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.