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Genome Details

Selected Rep_genome_ID: Rep_500
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
Rep_500 5,707,955 91.6436% 3.70011% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
PUL0420_Rep_500_C7 CGCFAM_00001 Yes 3 1 pectin
Rep_500_CGC45 CGCFAM_00001 Yes 5 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_500_CGC24 CGCFAM_00023 Yes 6 3
Rep_500_CGC61 CGCFAM_00023 Yes 4 2
Rep_500_CGC28 CGCFAM_00025 Yes 10 4 pectin/alpha-glucan
Rep_500_CGC1 CGCFAM_00031 Yes 11 4 pectin/galactan
Rep_500_CGC32 CGCFAM_00031 Yes 21 8 pectin/galactan
Rep_500_CGC95 CGCFAM_00033 Yes 8 4
Rep_500_CGC7 CGCFAM_00360 Yes 20 8 host glycan
Rep_500_CGC25 CGCFAM_00363 Yes 7 3
Rep_500_CGC101 CGCFAM_00479 Yes 15 4 host glycan
Rep_500_CGC86 CGCFAM_00542 Yes 10 5
Rep_500_CGC76 CGCFAM_00647 Yes 8 4
Rep_500_CGC47 CGCFAM_00716 Yes 4 1 alginate
Rep_500_CGC88 CGCFAM_00720 Yes 13 4 host glycan
Rep_500_CGC55 CGCFAM_00986 Yes 9 3
Rep_500_CGC85 CGCFAM_01476 Yes 11 4
Rep_500_CGC67 CGCFAM_01569 Yes 6 2
Rep_500_CGC11 CGCFAM_01646 Yes 14 6
Rep_500_CGC73 CGCFAM_01805 Yes 6 4
Rep_500_CGC80 CGCFAM_02229 Yes 27 13
Rep_500_CGC107 CGCFAM_02285 Yes 10 5
Rep_500_CGC71 CGCFAM_02718 Yes 5 2
Rep_500_CGC36 CGCFAM_02923 Yes 6 3
Rep_500_CGC65 CGCFAM_03108 Yes 14 6
Top CAZyme Families