Cluster: Rep_500_CGC73
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_500
- CGC Family ID: CGCFAM_01805
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_500_c_243 | Rep_500_c_243_12 | 7449 | 8915 | - | 3.A.1.147.2 |
| CAZyme | Rep_500_c_243 | Rep_500_c_243_13 | 8986 | 11181 | - | GH67 |
| CAZyme | Rep_500_c_243 | Rep_500_c_243_14 | 11192 | 12172 | - | GH43_1 |
| CAZyme | Rep_500_c_243 | Rep_500_c_243_15 | 12224 | 13360 | - | GH10 |
| TC | Rep_500_c_243 | Rep_500_c_243_16 | 13387 | 14895 | - | 2.A.2.3.6 |
| CAZyme | Rep_500_c_243 | Rep_500_c_243_17 | 15122 | 17122 | - | GH13_14 |
Gene ID: Rep_500_c_243_12
Type: TC
Location: 7449 - 8915 (-)
Type: TC
Location: 7449 - 8915 (-)
Gene ID: Rep_500_c_243_13
Type: CAZyme
Location: 8986 - 11181 (-)
Type: CAZyme
Location: 8986 - 11181 (-)
Gene ID: Rep_500_c_243_14
Type: CAZyme
Location: 11192 - 12172 (-)
Type: CAZyme
Location: 11192 - 12172 (-)
Gene ID: Rep_500_c_243_15
Type: CAZyme
Location: 12224 - 13360 (-)
Type: CAZyme
Location: 12224 - 13360 (-)
Gene ID: Rep_500_c_243_16
Type: TC
Location: 13387 - 14895 (-)
Type: TC
Location: 13387 - 14895 (-)
Gene ID: Rep_500_c_243_17
Type: CAZyme
Location: 15122 - 17122 (-)
Type: CAZyme
Location: 15122 - 17122 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides congonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_500_c_243_13 | vegan > omnivore | 1.13916 | 0.00358 |
| Rep_500_c_243_15 | vegan > omnivore | 1.78536 | 0.00358 |
| Rep_500_c_243_15 | vegetarian > omnivore | 1.89273 | 0.02280 |