Cluster: Rep_500_CGC25
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_500
- CGC Family ID: CGCFAM_00363
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_500_c_105 | Rep_500_c_105_11 | 17718 | 18686 | - | 1.A.34.1.3 |
| pfam | Rep_500_c_105 | Rep_500_c_105_12 | 18793 | 21411 | + | tRNA-synt_2c | DHHA1 | tRNA_SAD |
| CAZyme | Rep_500_c_105 | Rep_500_c_105_13 | 21587 | 23824 | + | GH92 |
| TF | Rep_500_c_105 | Rep_500_c_105_14 | 23854 | 24411 | + | GerE |
| STP | Rep_500_c_105 | Rep_500_c_105_15 | 24446 | 25453 | + | FecR |
| CAZyme | Rep_500_c_105 | Rep_500_c_105_16 | 25472 | 27775 | + | GH92 |
| CAZyme | Rep_500_c_105 | Rep_500_c_105_17 | 27772 | 30042 | + | GH92 |
Gene ID: Rep_500_c_105_11
Type: TC
Location: 17718 - 18686 (-)
Type: TC
Location: 17718 - 18686 (-)
Gene ID: Rep_500_c_105_12
Type: pfam
Location: 18793 - 21411 (+)
Type: pfam
Location: 18793 - 21411 (+)
Gene ID: Rep_500_c_105_13
Type: CAZyme
Location: 21587 - 23824 (+)
Type: CAZyme
Location: 21587 - 23824 (+)
Gene ID: Rep_500_c_105_14
Type: TF
Location: 23854 - 24411 (+)
Type: TF
Location: 23854 - 24411 (+)
Gene ID: Rep_500_c_105_15
Type: STP
Location: 24446 - 25453 (+)
Type: STP
Location: 24446 - 25453 (+)
Gene ID: Rep_500_c_105_16
Type: CAZyme
Location: 25472 - 27775 (+)
Type: CAZyme
Location: 25472 - 27775 (+)
Gene ID: Rep_500_c_105_17
Type: CAZyme
Location: 27772 - 30042 (+)
Type: CAZyme
Location: 27772 - 30042 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides congonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.