Cluster: Rep_500_CGC7
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 8
- Substrate: host glycan
- Genome ID: Rep_500
- CGC Family ID: CGCFAM_00360
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_500_c_25 | Rep_500_c_25_3 | 687 | 2321 | - | 8.A.46.1.1 |
| TC | Rep_500_c_25 | Rep_500_c_25_4 | 2333 | 5080 | - | 1.B.14.6.1 |
| CAZyme | Rep_500_c_25 | Rep_500_c_25_5 | 5271 | 7343 | - | GH20 |
| CAZyme | Rep_500_c_25 | Rep_500_c_25_6 | 7343 | 9667 | - | GH20 |
| CAZyme | Rep_500_c_25 | Rep_500_c_25_7 | 9704 | 12313 | - | GH2 |
| CAZyme | Rep_500_c_25 | Rep_500_c_25_8 | 12417 | 15569 | - | CE20 |
| sulfatase | Rep_500_c_25 | Rep_500_c_25_9 | 15698 | 16489 | - | S1_16 |
| CAZyme | Rep_500_c_25 | Rep_500_c_25_10 | 16549 | 18426 | - | GH20 |
| CAZyme | Rep_500_c_25 | Rep_500_c_25_11 | 18589 | 20220 | - | CBM93 | GH33 |
| TC | Rep_500_c_25 | Rep_500_c_25_12 | 20404 | 21996 | - | 8.A.46.1.4 |
| TC | Rep_500_c_25 | Rep_500_c_25_13 | 22026 | 25343 | - | 1.B.14.6.1 |
| pfam | Rep_500_c_25 | Rep_500_c_25_14 | 26324 | 27571 | - | Abhydrolase_7 |
| NULL(UNKNOWN) | Rep_500_c_25 | Rep_500_c_25_15 | 27682 | 29781 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_500_c_25 | Rep_500_c_25_16 | 29830 | 31380 | - | 8.A.46.1.4 |
| TC | Rep_500_c_25 | Rep_500_c_25_17 | 31403 | 34669 | - | 1.B.14.6.1 |
| CAZyme | Rep_500_c_25 | Rep_500_c_25_18 | 34681 | 35958 | - | GH33 |
| CAZyme | Rep_500_c_25 | Rep_500_c_25_19 | 35970 | 37133 | - | GH33 |
| pfam | Rep_500_c_25 | Rep_500_c_25_20 | 37175 | 38350 | - | GlcNAc_2-epim |
| pfam | Rep_500_c_25 | Rep_500_c_25_21 | 38362 | 39282 | - | DHDPS |
| TC | Rep_500_c_25 | Rep_500_c_25_22 | 39310 | 40551 | - | 2.A.1.14.25 |
Gene ID: Rep_500_c_25_3
Type: TC
Location: 687 - 2321 (-)
Type: TC
Location: 687 - 2321 (-)
Gene ID: Rep_500_c_25_4
Type: TC
Location: 2333 - 5080 (-)
Type: TC
Location: 2333 - 5080 (-)
Gene ID: Rep_500_c_25_5
Type: CAZyme
Location: 5271 - 7343 (-)
Type: CAZyme
Location: 5271 - 7343 (-)
Gene ID: Rep_500_c_25_6
Type: CAZyme
Location: 7343 - 9667 (-)
Type: CAZyme
Location: 7343 - 9667 (-)
Gene ID: Rep_500_c_25_7
Type: CAZyme
Location: 9704 - 12313 (-)
Type: CAZyme
Location: 9704 - 12313 (-)
Gene ID: Rep_500_c_25_8
Type: CAZyme
Location: 12417 - 15569 (-)
Type: CAZyme
Location: 12417 - 15569 (-)
Gene ID: Rep_500_c_25_9
Type: sulfatase
Location: 15698 - 16489 (-)
Type: sulfatase
Location: 15698 - 16489 (-)
Gene ID: Rep_500_c_25_10
Type: CAZyme
Location: 16549 - 18426 (-)
Type: CAZyme
Location: 16549 - 18426 (-)
Gene ID: Rep_500_c_25_11
Type: CAZyme
Location: 18589 - 20220 (-)
Type: CAZyme
Location: 18589 - 20220 (-)
Gene ID: Rep_500_c_25_12
Type: TC
Location: 20404 - 21996 (-)
Type: TC
Location: 20404 - 21996 (-)
Gene ID: Rep_500_c_25_13
Type: TC
Location: 22026 - 25343 (-)
Type: TC
Location: 22026 - 25343 (-)
Gene ID: Rep_500_c_25_14
Type: pfam
Location: 26324 - 27571 (-)
Type: pfam
Location: 26324 - 27571 (-)
Gene ID: Rep_500_c_25_15
Type:
Location: 27682 - 29781 (-)
Type:
Location: 27682 - 29781 (-)
Gene ID: Rep_500_c_25_16
Type: TC
Location: 29830 - 31380 (-)
Type: TC
Location: 29830 - 31380 (-)
Gene ID: Rep_500_c_25_17
Type: TC
Location: 31403 - 34669 (-)
Type: TC
Location: 31403 - 34669 (-)
Gene ID: Rep_500_c_25_18
Type: CAZyme
Location: 34681 - 35958 (-)
Type: CAZyme
Location: 34681 - 35958 (-)
Gene ID: Rep_500_c_25_19
Type: CAZyme
Location: 35970 - 37133 (-)
Type: CAZyme
Location: 35970 - 37133 (-)
Gene ID: Rep_500_c_25_20
Type: pfam
Location: 37175 - 38350 (-)
Type: pfam
Location: 37175 - 38350 (-)
Gene ID: Rep_500_c_25_21
Type: pfam
Location: 38362 - 39282 (-)
Type: pfam
Location: 38362 - 39282 (-)
Gene ID: Rep_500_c_25_22
Type: TC
Location: 39310 - 40551 (-)
Type: TC
Location: 39310 - 40551 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides congonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_500_c_25_14 | vegan > omnivore | 5.27765 | 0.00358 |