Cluster: Rep_500_CGC88
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate: host glycan
- Genome ID: Rep_500
- CGC Family ID: CGCFAM_00720
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_500_c_269 | Rep_500_c_269_13 | 17921 | 18820 | + | 2.A.7.3.57 |
| pfam | Rep_500_c_269 | Rep_500_c_269_14 | 18828 | 19478 | + | DUF3256 |
| pfam | Rep_500_c_269 | Rep_500_c_269_15 | 19506 | 20594 | - | APH |
| CAZyme | Rep_500_c_269 | Rep_500_c_269_16 | 20624 | 23965 | - | GH2 |
| TC | Rep_500_c_269 | Rep_500_c_269_17 | 24037 | 24927 | - | 2.A.115.1.2 |
| CAZyme | Rep_500_c_269 | Rep_500_c_269_18 | 25044 | 26453 | - | GH109 |
| pfam | Rep_500_c_269 | Rep_500_c_269_19 | 26912 | 28822 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_500_c_269 | Rep_500_c_269_20 | 28831 | 32028 | - | 1.B.14.6.1 |
| TF | Rep_500_c_269 | Rep_500_c_269_21 | 32169 | 36170 | - | 0035607 | 0036286 |
| sulfatase | Rep_500_c_269 | Rep_500_c_269_22 | 36364 | 37767 | + | S1_20 |
| CAZyme | Rep_500_c_269 | Rep_500_c_269_23 | 37779 | 40145 | + | CBM32 |
| sulfatase | Rep_500_c_269 | Rep_500_c_269_24 | 40152 | 41744 | + | S1_15 |
| CAZyme | Rep_500_c_269 | Rep_500_c_269_25 | 41749 | 43677 | + | GH36 |
Gene ID: Rep_500_c_269_13
Type: TC
Location: 17921 - 18820 (+)
Type: TC
Location: 17921 - 18820 (+)
Gene ID: Rep_500_c_269_14
Type: pfam
Location: 18828 - 19478 (+)
Type: pfam
Location: 18828 - 19478 (+)
Gene ID: Rep_500_c_269_15
Type: pfam
Location: 19506 - 20594 (-)
Type: pfam
Location: 19506 - 20594 (-)
Gene ID: Rep_500_c_269_16
Type: CAZyme
Location: 20624 - 23965 (-)
Type: CAZyme
Location: 20624 - 23965 (-)
Gene ID: Rep_500_c_269_17
Type: TC
Location: 24037 - 24927 (-)
Type: TC
Location: 24037 - 24927 (-)
Gene ID: Rep_500_c_269_18
Type: CAZyme
Location: 25044 - 26453 (-)
Type: CAZyme
Location: 25044 - 26453 (-)
Gene ID: Rep_500_c_269_19
Type: pfam
Location: 26912 - 28822 (-)
Type: pfam
Location: 26912 - 28822 (-)
Gene ID: Rep_500_c_269_20
Type: TC
Location: 28831 - 32028 (-)
Type: TC
Location: 28831 - 32028 (-)
Gene ID: Rep_500_c_269_21
Type: TF
Location: 32169 - 36170 (-)
Type: TF
Location: 32169 - 36170 (-)
Gene ID: Rep_500_c_269_22
Type: sulfatase
Location: 36364 - 37767 (+)
Type: sulfatase
Location: 36364 - 37767 (+)
Gene ID: Rep_500_c_269_23
Type: CAZyme
Location: 37779 - 40145 (+)
Type: CAZyme
Location: 37779 - 40145 (+)
Gene ID: Rep_500_c_269_24
Type: sulfatase
Location: 40152 - 41744 (+)
Type: sulfatase
Location: 40152 - 41744 (+)
Gene ID: Rep_500_c_269_25
Type: CAZyme
Location: 41749 - 43677 (+)
Type: CAZyme
Location: 41749 - 43677 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides congonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.