Cluster: Rep_500_CGC11
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_500
- CGC Family ID: CGCFAM_01646
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_500_c_50 | Rep_500_c_50_15 | 17965 | 20403 | - | PL30 |
| pfam | Rep_500_c_50 | Rep_500_c_50_16 | 20409 | 21338 | - | DUF5017 |
| TC | Rep_500_c_50 | Rep_500_c_50_17 | 21356 | 22978 | - | 8.A.46.1.3 |
| TC | Rep_500_c_50 | Rep_500_c_50_18 | 23002 | 26166 | - | 1.B.14.6.1 |
| CAZyme | Rep_500_c_50 | Rep_500_c_50_19 | 26231 | 27430 | - | GH88 |
| TF | Rep_500_c_50 | Rep_500_c_50_20 | 27702 | 31694 | + | HTH_AraC |
| CAZyme | Rep_500_c_50 | Rep_500_c_50_21 | 31801 | 32937 | + | GH117 | GH117 |
| CAZyme | Rep_500_c_50 | Rep_500_c_50_22 | 32984 | 35011 | + | PL8 |
| NULL(UNKNOWN) | Rep_500_c_50 | Rep_500_c_50_23 | 35664 | 36101 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | Rep_500_c_50 | Rep_500_c_50_24 | 36208 | 37518 | + | ATPase_2 |
| CAZyme | Rep_500_c_50 | Rep_500_c_50_25 | 37673 | 40042 | - | PL30 |
| CAZyme | Rep_500_c_50 | Rep_500_c_50_26 | 40062 | 41945 | - | GH29 |
| TC | Rep_500_c_50 | Rep_500_c_50_27 | 42203 | 45403 | + | 1.B.14.6.1 |
| TC | Rep_500_c_50 | Rep_500_c_50_28 | 45429 | 47084 | + | 8.A.46.1.3 |
Gene ID: Rep_500_c_50_15
Type: CAZyme
Location: 17965 - 20403 (-)
Type: CAZyme
Location: 17965 - 20403 (-)
Gene ID: Rep_500_c_50_16
Type: pfam
Location: 20409 - 21338 (-)
Type: pfam
Location: 20409 - 21338 (-)
Gene ID: Rep_500_c_50_17
Type: TC
Location: 21356 - 22978 (-)
Type: TC
Location: 21356 - 22978 (-)
Gene ID: Rep_500_c_50_18
Type: TC
Location: 23002 - 26166 (-)
Type: TC
Location: 23002 - 26166 (-)
Gene ID: Rep_500_c_50_19
Type: CAZyme
Location: 26231 - 27430 (-)
Type: CAZyme
Location: 26231 - 27430 (-)
Gene ID: Rep_500_c_50_20
Type: TF
Location: 27702 - 31694 (+)
Type: TF
Location: 27702 - 31694 (+)
Gene ID: Rep_500_c_50_21
Type: CAZyme
Location: 31801 - 32937 (+)
Type: CAZyme
Location: 31801 - 32937 (+)
Gene ID: Rep_500_c_50_22
Type: CAZyme
Location: 32984 - 35011 (+)
Type: CAZyme
Location: 32984 - 35011 (+)
Gene ID: Rep_500_c_50_23
Type:
Location: 35664 - 36101 (+)
Type:
Location: 35664 - 36101 (+)
Gene ID: Rep_500_c_50_24
Type: STP
Location: 36208 - 37518 (+)
Type: STP
Location: 36208 - 37518 (+)
Gene ID: Rep_500_c_50_25
Type: CAZyme
Location: 37673 - 40042 (-)
Type: CAZyme
Location: 37673 - 40042 (-)
Gene ID: Rep_500_c_50_26
Type: CAZyme
Location: 40062 - 41945 (-)
Type: CAZyme
Location: 40062 - 41945 (-)
Gene ID: Rep_500_c_50_27
Type: TC
Location: 42203 - 45403 (+)
Type: TC
Location: 42203 - 45403 (+)
Gene ID: Rep_500_c_50_28
Type: TC
Location: 45429 - 47084 (+)
Type: TC
Location: 45429 - 47084 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides congonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.