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Cluster: Rep_500_CGC76

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_500_c_249 Rep_500_c_249_8 9620 13033 + 1.B.14.6.1
pfam Rep_500_c_249 Rep_500_c_249_9 13049 15043 + SusD_RagB | SusD-like_3
pfam Rep_500_c_249 Rep_500_c_249_10 15057 16169 + F5_F8_type_C | Big_2
CAZyme Rep_500_c_249 Rep_500_c_249_11 16182 17393 + GH154
CAZyme Rep_500_c_249 Rep_500_c_249_12 17422 18531 + GH105
CAZyme Rep_500_c_249 Rep_500_c_249_13 18587 21448 - PL8_2
sulfatase Rep_500_c_249 Rep_500_c_249_14 21602 23152 - S1_27
CAZyme Rep_500_c_249 Rep_500_c_249_15 23280 24482 - GH88
Gene ID: Rep_500_c_249_8
Type: TC
Location: 9620 - 13033 (+)
Gene ID: Rep_500_c_249_9
Type: pfam
Location: 13049 - 15043 (+)
Gene ID: Rep_500_c_249_10
Type: pfam
Location: 15057 - 16169 (+)
Gene ID: Rep_500_c_249_11
Type: CAZyme
Location: 16182 - 17393 (+)
Gene ID: Rep_500_c_249_12
Type: CAZyme
Location: 17422 - 18531 (+)
Gene ID: Rep_500_c_249_13
Type: CAZyme
Location: 18587 - 21448 (-)
Gene ID: Rep_500_c_249_14
Type: sulfatase
Location: 21602 - 23152 (-)
Gene ID: Rep_500_c_249_15
Type: CAZyme
Location: 23280 - 24482 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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