dbCAN Logo

Cluster: Rep_500_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_500_c_208 Rep_500_c_208_1 70 2079 - GH97
TF Rep_500_c_208 Rep_500_c_208_2 2196 2870 + Trans_reg_C
STP Rep_500_c_208 Rep_500_c_208_3 2894 4225 + HATPase_c | HisKA
TC Rep_500_c_208 Rep_500_c_208_4 4322 7447 - 2.A.6.1.17
TC Rep_500_c_208 Rep_500_c_208_5 7465 8559 - 2.A.6.1.5
TC Rep_500_c_208 Rep_500_c_208_6 8582 9847 - 2.A.6.1.5
pfam Rep_500_c_208 Rep_500_c_208_7 10088 10447 + Thioredoxin | Thioredoxin_2 | TraF
CAZyme Rep_500_c_208 Rep_500_c_208_8 10611 11783 - CE9
CAZyme Rep_500_c_208 Rep_500_c_208_9 11804 12970 - CE9
Gene ID: Rep_500_c_208_1
Type: CAZyme
Location: 70 - 2079 (-)
Gene ID: Rep_500_c_208_2
Type: TF
Location: 2196 - 2870 (+)
Gene ID: Rep_500_c_208_3
Type: STP
Location: 2894 - 4225 (+)
Gene ID: Rep_500_c_208_4
Type: TC
Location: 4322 - 7447 (-)
Gene ID: Rep_500_c_208_5
Type: TC
Location: 7465 - 8559 (-)
Gene ID: Rep_500_c_208_6
Type: TC
Location: 8582 - 9847 (-)
Gene ID: Rep_500_c_208_7
Type: pfam
Location: 10088 - 10447 (+)
Gene ID: Rep_500_c_208_8
Type: CAZyme
Location: 10611 - 11783 (-)
Gene ID: Rep_500_c_208_9
Type: CAZyme
Location: 11804 - 12970 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List