Genome Details
Selected Rep_genome_ID: Rep_2080
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp003478355
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A72.bin_3 | 3,698,736 | 99.37% | 0.32% | China(Inner Mongolia) | Asia | IMGG |
| AG309_26 | 3,298,642 | 98.73% | 0.02% | NA | Africa | H3AfricaPhase2 |
| CGMR026981 | 3,109,195 | 96.52% | 0% | China | Asia | CGMR |
| HRGMv2_2292 | 3,365,749 | 99.36% | 0% | Congo | Africa | HRGM |
| Rep_2080 | 3,822,886 | 99.2089% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_2080_CGC27 | CGCFAM_00039 | Yes | 5 | 1 | |
| Rep_2080_CGC37 | CGCFAM_00039 | Yes | 5 | 3 | |
| Rep_2080_CGC39 | CGCFAM_00041 | Yes | 10 | 3 | |
| Rep_2080_CGC3 | CGCFAM_00086 | Yes | 3 | 1 | |
| Rep_2080_CGC19 | CGCFAM_00142 | Yes | 5 | 1 | |
| Rep_2080_CGC21 | CGCFAM_00157 | Yes | 7 | 1 | |
| Rep_2080_CGC14 | CGCFAM_00163 | Yes | 3 | 1 | |
| Rep_2080_CGC7 | CGCFAM_00259 | Yes | 6 | 2 | |
| Rep_2080_CGC33 | CGCFAM_00422 | Yes | 6 | 2 | |
| Rep_2080_CGC11 | CGCFAM_00662 | Yes | 3 | 1 | |
| Rep_2080_CGC28 | CGCFAM_00865 | Yes | 5 | 2 | |
| Rep_2080_CGC24 | CGCFAM_01512 | Yes | 5 | 1 | |
| Rep_2080_CGC42 | CGCFAM_01638 | Yes | 4 | 2 | |
| Rep_2080_CGC22 | CGCFAM_02431 | Yes | 4 | 1 | |
| Rep_2080_CGC20 | CGCFAM_02606 | Yes | 5 | 1 | |
| Rep_2080_CGC6 | CGCFAM_02606 | Yes | 12 | 1 | |
| Rep_2080_CGC26 | CGCFAM_04945 | Yes | 9 | 1 | |
| Rep_2080_CGC17 | CGCFAM_05049 | Yes | 3 | 1 | |
| Rep_2080_CGC38 | CGCFAM_07748 | Yes | 11 | 2 | |
| Rep_2080_CGC40 | CGCFAM_08672 | Yes | 14 | 3 | |
| Rep_2080_CGC23 | CGCFAM_10024 | Yes | 6 | 2 | |
| Rep_2080_CGC4 | CGCFAM_10025 | Yes | 18 | 1 | |
| Rep_2080_CGC18 | CGCFAM_10819 | Yes | 5 | 1 | |
| Rep_2080_CGC16 | CGCFAM_11134 | Yes | 4 | 1 |
Top CAZyme Families