Cluster: Rep_2080_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2080
- CGC Family ID: CGCFAM_10024
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2080_c_24 | Rep_2080_c_24_63 | 61153 | 62049 | - | 2.A.45.2.6 |
| pfam | Rep_2080_c_24 | Rep_2080_c_24_64 | 62004 | 62312 | - | CitMHS |
| STP | Rep_2080_c_24 | Rep_2080_c_24_65 | 62316 | 63251 | - | PfkB |
| CAZyme | Rep_2080_c_24 | Rep_2080_c_24_66 | 63367 | 64683 | - | GH28 |
| pfam | Rep_2080_c_24 | Rep_2080_c_24_67 | 64723 | 65535 | - | YitT_membrane | DUF2179 |
| CAZyme | Rep_2080_c_24 | Rep_2080_c_24_68 | 65792 | 66811 | - | GT2 |
Gene ID: Rep_2080_c_24_63
Type: TC
Location: 61153 - 62049 (-)
Type: TC
Location: 61153 - 62049 (-)
Gene ID: Rep_2080_c_24_64
Type: pfam
Location: 62004 - 62312 (-)
Type: pfam
Location: 62004 - 62312 (-)
Gene ID: Rep_2080_c_24_65
Type: STP
Location: 62316 - 63251 (-)
Type: STP
Location: 62316 - 63251 (-)
Gene ID: Rep_2080_c_24_66
Type: CAZyme
Location: 63367 - 64683 (-)
Type: CAZyme
Location: 63367 - 64683 (-)
Gene ID: Rep_2080_c_24_67
Type: pfam
Location: 64723 - 65535 (-)
Type: pfam
Location: 64723 - 65535 (-)
Gene ID: Rep_2080_c_24_68
Type: CAZyme
Location: 65792 - 66811 (-)
Type: CAZyme
Location: 65792 - 66811 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp003478355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2080_c_24_65 | vegetarian > vegan | 1.03980 | 0.04641 |