Cluster: Rep_2080_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2080
- CGC Family ID: CGCFAM_00259
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2080_c_2 | Rep_2080_c_2_51 | 46723 | 47145 | - | GH88 |
| CAZyme | Rep_2080_c_2 | Rep_2080_c_2_52 | 47103 | 47831 | - | GH88 |
| sulfatase | Rep_2080_c_2 | Rep_2080_c_2_53 | 48022 | 49218 | - | S1_27;S1_N.C. |
| TC | Rep_2080_c_2 | Rep_2080_c_2_54 | 49236 | 50024 | - | 3.A.1.1.10 |
| TC | Rep_2080_c_2 | Rep_2080_c_2_55 | 49981 | 51030 | - | 3.A.1.1.10 |
| TC | Rep_2080_c_2 | Rep_2080_c_2_56 | 51110 | 52663 | - | 3.A.1.1.9 |
Gene ID: Rep_2080_c_2_51
Type: CAZyme
Location: 46723 - 47145 (-)
Type: CAZyme
Location: 46723 - 47145 (-)
Gene ID: Rep_2080_c_2_52
Type: CAZyme
Location: 47103 - 47831 (-)
Type: CAZyme
Location: 47103 - 47831 (-)
Gene ID: Rep_2080_c_2_53
Type: sulfatase
Location: 48022 - 49218 (-)
Type: sulfatase
Location: 48022 - 49218 (-)
Gene ID: Rep_2080_c_2_54
Type: TC
Location: 49236 - 50024 (-)
Type: TC
Location: 49236 - 50024 (-)
Gene ID: Rep_2080_c_2_55
Type: TC
Location: 49981 - 51030 (-)
Type: TC
Location: 49981 - 51030 (-)
Gene ID: Rep_2080_c_2_56
Type: TC
Location: 51110 - 52663 (-)
Type: TC
Location: 51110 - 52663 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp003478355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.