Cluster: Rep_2080_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2080
- CGC Family ID: CGCFAM_10819
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2080_c_12 | Rep_2080_c_12_5 | 3672 | 4196 | + | 3.A.1.1.19 |
| pfam | Rep_2080_c_12 | Rep_2080_c_12_6 | 4160 | 4546 | + | BPD_transp_1 |
| TC | Rep_2080_c_12 | Rep_2080_c_12_7 | 4604 | 5389 | + | 3.A.1.1.33 |
| TC | Rep_2080_c_12 | Rep_2080_c_12_8 | 5431 | 6420 | + | 3.A.1.1.44 |
| CAZyme | Rep_2080_c_12 | Rep_2080_c_12_9 | 6930 | 8102 | + | PL22 | PL22_2 |
Gene ID: Rep_2080_c_12_5
Type: TC
Location: 3672 - 4196 (+)
Type: TC
Location: 3672 - 4196 (+)
Gene ID: Rep_2080_c_12_6
Type: pfam
Location: 4160 - 4546 (+)
Type: pfam
Location: 4160 - 4546 (+)
Gene ID: Rep_2080_c_12_7
Type: TC
Location: 4604 - 5389 (+)
Type: TC
Location: 4604 - 5389 (+)
Gene ID: Rep_2080_c_12_8
Type: TC
Location: 5431 - 6420 (+)
Type: TC
Location: 5431 - 6420 (+)
Gene ID: Rep_2080_c_12_9
Type: CAZyme
Location: 6930 - 8102 (+)
Type: CAZyme
Location: 6930 - 8102 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp003478355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.