Cluster: Rep_2080_CGC42
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2080
- CGC Family ID: CGCFAM_01638
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2080_c_27 | Rep_2080_c_27_294 | 211628 | 212998 | + | 2.A.22.5.3 |
| CAZyme | Rep_2080_c_27 | Rep_2080_c_27_295 | 213081 | 214964 | - | PL33_1 |
| NULL(UNKNOWN) | Rep_2080_c_27 | Rep_2080_c_27_296 | 215060 | 215608 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2080_c_27 | Rep_2080_c_27_297 | 215583 | 217118 | + | GH2 |
Gene ID: Rep_2080_c_27_294
Type: TC
Location: 211628 - 212998 (+)
Type: TC
Location: 211628 - 212998 (+)
Gene ID: Rep_2080_c_27_295
Type: CAZyme
Location: 213081 - 214964 (-)
Type: CAZyme
Location: 213081 - 214964 (-)
Gene ID: Rep_2080_c_27_296
Type:
Location: 215060 - 215608 (+)
Type:
Location: 215060 - 215608 (+)
Gene ID: Rep_2080_c_27_297
Type: CAZyme
Location: 215583 - 217118 (+)
Type: CAZyme
Location: 215583 - 217118 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp003478355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.