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Cluster: Rep_2080_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2080_c_24 Rep_2080_c_24_332 315251 315997 - 3.A.1.3.25
TC Rep_2080_c_24 Rep_2080_c_24_333 315987 316625 - 3.A.1.3.20
TC Rep_2080_c_24 Rep_2080_c_24_334 316716 317555 - 3.A.1.3.27
pfam Rep_2080_c_24 Rep_2080_c_24_335 317757 318500 + TMEM164
CAZyme Rep_2080_c_24 Rep_2080_c_24_336 318479 319429 - CE4
TC Rep_2080_c_24 Rep_2080_c_24_337 319768 320262 + 3.D.1.5.1
pfam Rep_2080_c_24 Rep_2080_c_24_338 320281 320658 + 2Fe-2S_thioredx
TC Rep_2080_c_24 Rep_2080_c_24_339 320670 321917 + 3.D.1.5.1
TC Rep_2080_c_24 Rep_2080_c_24_340 321932 322456 + 3.D.1.5.1
Gene ID: Rep_2080_c_24_332
Type: TC
Location: 315251 - 315997 (-)
Gene ID: Rep_2080_c_24_333
Type: TC
Location: 315987 - 316625 (-)
Gene ID: Rep_2080_c_24_334
Type: TC
Location: 316716 - 317555 (-)
Gene ID: Rep_2080_c_24_335
Type: pfam
Location: 317757 - 318500 (+)
Gene ID: Rep_2080_c_24_336
Type: CAZyme
Location: 318479 - 319429 (-)
Gene ID: Rep_2080_c_24_337
Type: TC
Location: 319768 - 320262 (+)
Gene ID: Rep_2080_c_24_338
Type: pfam
Location: 320281 - 320658 (+)
Gene ID: Rep_2080_c_24_339
Type: TC
Location: 320670 - 321917 (+)
Gene ID: Rep_2080_c_24_340
Type: TC
Location: 321932 - 322456 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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