Cluster: Rep_2080_CGC33
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2080
- CGC Family ID: CGCFAM_00422
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2080_c_24 | Rep_2080_c_24_570 | 537561 | 539054 | - | GH77 |
| TC | Rep_2080_c_24 | Rep_2080_c_24_571 | 539080 | 539862 | - | 3.A.1.1.45 |
| CAZyme | Rep_2080_c_24 | Rep_2080_c_24_572 | 540092 | 541771 | - | GH13_31 |
| NULL(UNKNOWN) | Rep_2080_c_24 | Rep_2080_c_24_573 | 541950 | 542240 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2080_c_24 | Rep_2080_c_24_574 | 542356 | 542850 | - | 5.A.3.3.2 |
| TC | Rep_2080_c_24 | Rep_2080_c_24_575 | 543032 | 544780 | - | 5.A.3.3.2 |
Gene ID: Rep_2080_c_24_570
Type: CAZyme
Location: 537561 - 539054 (-)
Type: CAZyme
Location: 537561 - 539054 (-)
Gene ID: Rep_2080_c_24_571
Type: TC
Location: 539080 - 539862 (-)
Type: TC
Location: 539080 - 539862 (-)
Gene ID: Rep_2080_c_24_572
Type: CAZyme
Location: 540092 - 541771 (-)
Type: CAZyme
Location: 540092 - 541771 (-)
Gene ID: Rep_2080_c_24_573
Type:
Location: 541950 - 542240 (-)
Type:
Location: 541950 - 542240 (-)
Gene ID: Rep_2080_c_24_574
Type: TC
Location: 542356 - 542850 (-)
Type: TC
Location: 542356 - 542850 (-)
Gene ID: Rep_2080_c_24_575
Type: TC
Location: 543032 - 544780 (-)
Type: TC
Location: 543032 - 544780 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp003478355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.