Cluster: Rep_2080_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2080
- CGC Family ID: CGCFAM_11134
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2080_c_3 | Rep_2080_c_3_555 | 514048 | 515190 | + | GH28 |
| NULL(UNKNOWN) | Rep_2080_c_3 | Rep_2080_c_3_556 | 515162 | 515392 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2080_c_3 | Rep_2080_c_3_557 | 515407 | 516807 | - | 2.A.25.1.9 |
| TC | Rep_2080_c_3 | Rep_2080_c_3_558 | 516972 | 517733 | + | 9.B.158.1.1 |
Gene ID: Rep_2080_c_3_555
Type: CAZyme
Location: 514048 - 515190 (+)
Type: CAZyme
Location: 514048 - 515190 (+)
Gene ID: Rep_2080_c_3_556
Type:
Location: 515162 - 515392 (+)
Type:
Location: 515162 - 515392 (+)
Gene ID: Rep_2080_c_3_557
Type: TC
Location: 515407 - 516807 (-)
Type: TC
Location: 515407 - 516807 (-)
Gene ID: Rep_2080_c_3_558
Type: TC
Location: 516972 - 517733 (+)
Type: TC
Location: 516972 - 517733 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp003478355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.